Current location: Chemistry > Computational > Molecular Dynamics
1. NAMD Scalable Molecular Dynamics
NAMD is a parallel, object-oriented molecular dynamics code designed for high-performance simulation of large biomolecular systems.
http://www.ks.uiuc.edu/Research/namd/ - 13-04-2003
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[detailed information]
Rating: [7.00] Votes: [1554]
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3. Seascape Learning!
Seascape offers computational chemistry and biology software/services including molecular dynamics calculations.
http://www.seascapelearning.com - 23-09-2002
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[detailed information]
Rating: [6.00] Votes: [1254]
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4. The MD Group
The MD Group is concerned with molecular and mesoscopic dynamics simulation studies of complex biomolecular systems such as biopolymers and lipid aggregates.
http://md.chem.rug.nl/ - 22-04-2001
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[detailed information]
Rating: [6.00] Votes: [1732]
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6. MD simulations of actin
Simulations on Mg and Ca-bound actin, water diffusion pathways and monomer interactions in F-actin.
http://yakko.bme.virginia.edu/cm/test.html - 23-04-2000
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[detailed information]
Rating: [5.00] Votes: [1673]
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7. Molecular Dynamics
Focuses on parallel molecular dynamics: algorithms, benchmark timings, codes and simulation results. Includes several article references.
http://www.cs.sandia.gov/~sjplimp/md.html - 09-07-2003
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[detailed information]
Rating: [5.00] Votes: [491]
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8. Molecular Dynamics
Includes an extensive tutorial, with sample programs in Fortran 90, and links to software packages.
http://www.fisica.uniud.it/~ercolessi/md/ - 08-11-2000
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[detailed information]
Rating: [5.00] Votes: [1090]
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9. MD Engine II PC
MD Engine II PC from Fuji Xerox is a high performance accelerator board for the PC that dramatically increases the speed of molecular dynamic simulations. Distributed by CONFLEX Corporation
http://md-engine.conflex.us/ - 22-01-2001
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[detailed information]
Rating: [4.00] Votes: [1932]
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